The calls to rtc_init_start(), sdcard_init() and storage_init() are all
guarded by a check for first_soft_reset, so it's simpler to just put them
all before the soft-reset loop, without the check.
The call to machine_init() can also go before the soft-reset loop because
it is only needed to check the reset cause which can happen once at the
first boot. To allow this to work, the reset cause must be set to SOFT
upon a soft-reset, which is the role of the new function machine_deinit().
This is to keep the top-level directory clean, to make it clear what is
core and what is a port, and to allow the repository to grow with new ports
in a sustainable way.